Troubleshooting DataCite issue on dataset publish · troubleshooting

Stream: troubleshooting

Topic: Troubleshooting DataCite issue on dataset publish

Brian Cassidy (Dec 13 2023 at 19:04):

I'm unable to publish a dataset, so I checked the serer log and I see:

[2023-12-13T13:21:23.029-0400] [Payara 5.2022.3] [WARNING] [] [edu.harvard.iq.dataverse.engine.command.impl.FinalizeDatasetPublicationCommand] [tid: _ThreadID=213 _ThreadName=__ejb-thread-pool9] [timeMillis: 1702488083029] [levelValue: 900] [[
  Failed to reserve the identifier doi:10.25545/4UPJ00; notifying the user(s), unlocking the dataset]]

Is there any way to get a little more detail about that?

[FYI: DV ver 5.14]

Philip Durbin 🚀 (Dec 13 2023 at 19:07):

Weird. Is the dataset locked?

Brian Cassidy (Dec 13 2023 at 19:10):

...how can i tell? :)

Philip Durbin 🚀 (Dec 13 2023 at 19:12):

https://guides.dataverse.org/en/5.14/api/native-api.html#manage-locks-on-a-specific-dataset

Brian Cassidy (Dec 13 2023 at 19:16):

{"status":"OK","data":[]}

Philip Durbin 🚀 (Dec 13 2023 at 19:24):

Ok, so I guess "unlocking the dataset" was true. Hmm.

Philip Durbin 🚀 (Dec 13 2023 at 19:24):

Do other datasets publish ok?

Brian Cassidy (Dec 13 2023 at 19:28):

Not sure. We don't publish a whole lot. I see there was a dataset published successfully on Oct 12th.

Philip Durbin 🚀 (Dec 13 2023 at 19:29):

What if you try again? Same thing?

Brian Cassidy (Dec 13 2023 at 19:35):

yea -- i tried it twice before coming here.

Philip Durbin 🚀 (Dec 13 2023 at 19:41):

bah

Philip Durbin 🚀 (Dec 13 2023 at 19:41):

Let's look at https://status.datacite.org

Philip Durbin 🚀 (Dec 13 2023 at 19:42):

All green.

Philip Durbin 🚀 (Dec 13 2023 at 19:55):

Can you please try https://guides.dataverse.org/en/5.14/api/native-api.html#get-info-on-a-pid on that DOI?

Brian Cassidy (Dec 13 2023 at 20:00):

{"status":"OK","data":{"id":"10.25545/4upj00","state":"draft"}}⏎

Philip Durbin 🚀 (Dec 13 2023 at 20:13):

Ok, the two states on the DataCite side are "draft" and "findable". Your DOI is in draft. From Dataverse's perspective that means the DOI is already reserved.

Philip Durbin 🚀 (Dec 13 2023 at 20:14):

So we should tell Dataverse the DOI is already reserved/registered on the DataCite side.

Philip Durbin 🚀 (Dec 13 2023 at 20:14):

Unfortunately, this will require some database hacking. :sweat_smile:

Philip Durbin 🚀 (Dec 13 2023 at 20:15):

Let's use https://guides.dataverse.org/en/5.14/schemaspy/tables/dvobject.html for reference.

Philip Durbin 🚀 (Dec 13 2023 at 20:15):

On the dvobject table there is a column called identifierregistered. It's a boolean. For that dataset, can you please try flipping it from false to true?