Balázs Pataki (Nov 09 2023 at 14:48): Balázs Pataki (Nov 09 2023 at 14:48):We are still on 5.13 but I thought we may upgrade to 5.14 so that we have the awesome docker support out of the box.
I did this:
git checkout v5.14
mvn -Pct -DskipTests=true clean package
mvn -Pct docker:run
The containers started up but then it failes with this:
dev_dataverse> [#|2023-11-09T14:37:07.003+0000|INFO|Payara 6.2023.8|org.jboss.weld.Bootstrap|_ThreadID=28;_ThreadName=RunLevelControllerThread-1699540613511;_TimeMillis=1699540627003;_LevelValue=800;|
dev_dataverse> WELD-000119: Not generating any bean definitions from org.omnifaces.cdi.push.SocketSessionManager because of underlying class loading error: Type javax.websocket.CloseReason$CloseCode not found. If this is unexpected, enable DEBUG logging to see the full error.|#]
dev_dataverse>
dev_dataverse> [#|2023-11-09T14:37:07.011+0000|SEVERE|Payara 6.2023.8|javax.enterprise.system.core|_ThreadID=28;_ThreadName=RunLevelControllerThread-1699540613511;_TimeMillis=1699540627011;_LevelValue=1000;_MessageID=NCLS-CORE-00026;|
dev_dataverse> Exception during lifecycle processing
dev_dataverse> org.glassfish.deployment.common.DeploymentException: CDI deployment failure:javax/faces/component/behavior/ClientBehaviorHolder -- javax/faces/component/behavior/ClientBehaviorHolder
dev_dataverse> at java.base/java.lang.ClassLoader.defineClass1(Native Method)
dev_dataverse> at java.base/java.lang.ClassLoader.defineClass(Unknown Source)
dev_dataverse> at java.base/java.security.SecureClassLoader.defineClass(Unknown Source)
dev_dataverse> at org.glassfish.web.loader.WebappClassLoader.defineLoadedClass(WebappClassLoader.java:3504)
dev_dataverse> at org.glassfish.web.loader.WebappClassLoader.findClass(WebappClassLoader.java:1246)
dev_dataverse> at org.glassfish.web.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1818)
dev_dataverse> at org.glassfish.web.loader.WebappClassLoader.loadClass(WebappClassLoader.java:1696)
dev_dataverse> at java.base/java.lang.Class.getEnclosingMethod0(Native Method)
dev_dataverse> at java.base/java.lang.Class.hasEnclosingMethodInfo(Unknown Source)
dev_dataverse> at java.base/java.lang.Class.isLocalOrAnonymousClass(Unknown Source)
dev_dataverse> at java.base/java.lang.Class.isAnonymousClass(Unknown Source)
dev_dataverse> at org.jboss.weld.bootstrap.AnnotatedTypeLoader.internalLoadAnnotatedType(AnnotatedTypeLoader.java:92)
dev_dataverse> at org.jboss.weld.bootstrap.AnnotatedTypeLoader.loadAnnotatedType(AnnotatedTypeLoader.java:75)
dev_dataverse> at org.jboss.weld.bootstrap.BeanDeployer.addClass(BeanDeployer.java:92)
dev_dataverse> at org.jboss.weld.bootstrap.BeanDeployer.addLoadedClasses(BeanDeployer.java:199)
dev_dataverse> at org.jboss.weld.bootstrap.BeanDeployment.createClasses(BeanDeployment.java:197)
dev_dataverse> at org.jboss.weld.bootstrap.WeldStartup.startInitialization(WeldStartup.java:409)
dev_dataverse> at org.jboss.weld.bootstrap.WeldBootstrap.startInitialization(WeldBootstrap.java:80)
dev_dataverse> at org.glassfish.weld.WeldDeployer.processApplicationLoaded(WeldDeployer.java:579)
dev_dataverse> at org.glassfish.weld.WeldDeployer.event(WeldDeployer.java:437)
dev_dataverse> at org.glassfish.kernel.event.EventsImpl.send(EventsImpl.java:131)
dev_dataverse> at org.glassfish.internal.data.ApplicationInfo.load(ApplicationInfo.java:344)
dev_dataverse> at com.sun.enterprise.v3.server.ApplicationLifecycle.prepare(ApplicationLifecycle.java:580)
dev_dataverse> at org.glassfish.deployment.admin.DeployCommand.execute(DeployCommand.java:570)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:556)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$2$1.run(CommandRunnerImpl.java:552)
dev_dataverse> at java.base/java.security.AccessController.doPrivileged(Unknown Source)
dev_dataverse> at java.base/javax.security.auth.Subject.doAs(Unknown Source)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$2.execute(CommandRunnerImpl.java:551)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:582)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$3.run(CommandRunnerImpl.java:574)
dev_dataverse> at java.base/java.security.AccessController.doPrivileged(Unknown Source)
dev_dataverse> at java.base/javax.security.auth.Subject.doAs(Unknown Source)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:573)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl.doCommand(CommandRunnerImpl.java:1497)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1879)
dev_dataverse> at com.sun.enterprise.v3.admin.CommandRunnerImpl$ExecutionContext.execute(CommandRunnerImpl.java:1755)
dev_dataverse> at com.sun.enterprise.admin.cli.embeddable.CommandExecutorImpl.executeCommand(CommandExecutorImpl.java:183)
dev_dataverse> at com.sun.enterprise.admin.cli.embeddable.CommandExecutorImpl.run(CommandExecutorImpl.java:96)
dev_dataverse> at fish.payara.boot.runtime.BootCommand.execute(BootCommand.java:69)
dev_dataverse> at fish.payara.boot.runtime.BootCommands.executeCommands(BootCommands.java:166)
dev_dataverse> at fish.payara.boot.runtime.BootCommands.executeCommands(BootCommands.java:160)
dev_dataverse> at com.sun.enterprise.v3.bootstrap.BootCommandService.doBootCommands(BootCommandService.java:81)
dev_dataverse> at com.sun.enterprise.v3.bootstrap.BootCommandService.postConstruct(BootCommandService.java:91)
dev_dataverse> at org.jvnet.hk2.internal.ClazzCreator.postConstructMe(ClazzCreator.java:303)
dev_dataverse> at org.jvnet.hk2.internal.ClazzCreator.create(ClazzCreator.java:351)
dev_dataverse> at org.jvnet.hk2.internal.SystemDescriptor.create(SystemDescriptor.java:466)
dev_dataverse> at org.glassfish.hk2.runlevel.internal.AsyncRunLevelContext.findOrCreate(AsyncRunLevelContext.java:281)
dev_dataverse> at org.glassfish.hk2.runlevel.RunLevelContext.findOrCreate(RunLevelContext.java:65)
dev_dataverse> at org.jvnet.hk2.internal.Utilities.createService(Utilities.java:2103)
dev_dataverse> at org.jvnet.hk2.internal.ServiceHandleImpl.getService(ServiceHandleImpl.java:93)
dev_dataverse> at org.jvnet.hk2.internal.ServiceHandleImpl.getService(ServiceHandleImpl.java:67)
dev_dataverse> at org.glassfish.hk2.runlevel.internal.CurrentTaskFuture$QueueRunner.oneJob(CurrentTaskFuture.java:1213)
dev_dataverse> at org.glassfish.hk2.runlevel.internal.CurrentTaskFuture$QueueRunner.run(CurrentTaskFuture.java:1144)
dev_dataverse> at org.glassfish.hk2.runlevel.internal.CurrentTaskFuture$UpOneLevel.run(CurrentTaskFuture.java:762)
dev_dataverse> at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
dev_dataverse> at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
dev_dataverse> at java.base/java.lang.Thread.run(Unknown Source)
dev_dataverse> |#]
dev_dataverse>
I think the problem is that it runs Payara 6.2023.8 while the 5.14 version actually is for 5.2022.3 (based on modules/dataverse-parent/pom.xml)
The docker build scripts probably take the latest version of Payara that's why we end up with 6.2023.8.
Can you please help me where I could set an explicit version of Payara to be installed in the container? I just couldn't find it anywhere.
Balázs Pataki (Nov 09 2023 at 15:27):I found this issue of Phil with a similar bug:
https://github.com/IQSS/dataverse/issues/9749
So, it may not be related to the Payara version as it was 5.2022.5 in the issue.
Philip Durbin 🚀 (Nov 09 2023 at 15:34):As we said in the call, please check your base image and let us know if it helps!
Balázs Pataki (Nov 09 2023 at 15:51):Yes, it was the base image. So, the best way to do is:
git checkout v5.14
mvn -Pct -f modules/container-base install
mvn -Pct clean package
mvn -Pct docker:run
Ah, I see you mentioned the fix here too: https://github.com/IQSS/dataverse/issues/9749#issuecomment-1804095033
Philip Durbin 🚀 (Nov 09 2023 at 15:59):Thanks!
Notification Bot (Nov 09 2023 at 20:06):Balázs Pataki has marked this topic as resolved.
Last updated: Oct 30 2025 at 05:14 UTC